Platform Units
Universal Multimodal Datastore
Store, organize and retrieve complex biomedical data
Genomcore UMD is a high-performance datastore designed to manage and interlink diverse biomedical data types—from genomics and clinical records to time-series and imaging—offering unmatched interoperability, observability and structure.
One datastore, all your biomedical data
UMD provides fine-grained, structured storage for the diverse types of data that define precision medicine. Whether it's genomics, time-series or clinical values, each dataset is managed in a format ready for real-world healthcare use.
Genomics datastore supports high performance storage and retrieval of individual variant calls for germline, somatic and trio experiments as well as custom annotations.
Biovalues datastore allows efficient storage and retrieval of metabolic biomarkers, supporting on-the-fly normalization using LOINC codes and associated reference thresholds.
Image datastore allows metadata extraction from DICOM files and their integration with other entities in the UMD.
Metrics datastore is designed to store time-series from activity monitors and biosensors enabling ranged queries with automatic aggregation functions.
Clinical Records and patient-owned datasets can be customized with UMD Records system, supporting structured sections and ontology terms.
Model your biomedical data with structured records
From ready-to-use records to fully custom templates, UMD gives you complete control over how you structure and relate biomedical information—tailored to your workflows, compliant by design.
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Document
Store general files and attach relevant metadata
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Form
Collect structured inputs from patients or end-users
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Image
Manage medical imaging files and associated metadata
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Insight
Display structured results and interpretations
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Ontology Term
Use standardized ontology codes
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Patient
Link clinical data to individual profiles securely
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Study
Group multimodal data into project-specific records
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Task
Track outputs and parameters from analysis applications
Design your own data templates
Define your own record types with tailored fields, behaviors and relationships using our visual templating system.
Reusable templates
Use the same schema across multiple projects or workflows
Workflow adaptability
Define attributes and logic that fit your real-life processes
Semantic linking
Connect records through ontology-based relationships
External compatibility
Native support for HL7, FHIR, OMOP and other standards
Store, connect and scale without friction
UMD simplifies how biomedical data is handled at scale, offering native support for distributed file systems, seamless integrations, and real-time interoperability with other tools and platforms.
Distributed file system
Upload and manage large binary files (BLOBs) with embedded viewers, restricted sharing, and unified access through an emulated file browser.
Importers, parsers and connectors
Instantly find experiments with shared genomic variants, speeding up analysis and uncovering key insights faster.
Interoperability by design
UMD is fully integrated with the Genomcore ecosystem—connect your datasets with analytical apps, reporting modules or external platforms effortlessly.
